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SRX12379241: Exome sequence of wild house mouse TAS_567
1 ILLUMINA (Illumina HiSeq 4000) run: 22.5M spots, 6.8G bases, 2.4Gb downloads

Design: exome capture
Submitted by: University of California, Berkeley
Study: High elevation adaptation in wild house mice in South America based on exome sequencing
show Abstracthide Abstract
To examine the process of adaptation to a novel environment, we sequenced exomes from house mice sampled across two elevational transects in the Andes. We show house mice in Ecuador and Bolivia colonized high elevation independently. The response to selection at high elevation was largely transect-specific, with a small subset of genes under parallel selection. We also found a number of hypoxia-associated genes that exhibited a threshold effect, that is, a large shift in allele frequency at the highest elevations.
Sample:
SAMN21873413 • SRS10350068 • All experiments • All runs
Library:
Name: TAS_567
Instrument: Illumina HiSeq 4000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: other
Layout: PAIRED
Runs: 1 run, 22.5M spots, 6.8G bases, 2.4Gb
Run# of Spots# of BasesSizePublished
SRR1609286322,541,9946.8G2.4Gb2022-06-23

ID:
16602127

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